Software

 
 
[Click or right-click on the link to download the files.]
 
 
POET: an evo-devo method to optimize the weights of large artificial neural networks
 
zip file with source
version PU140330_H18  
 
WeightLESS: branch and topology testing using weighted least squares
 
 
zip files with source for Uni*x, complied for Windoze:  
version 2.93 (the original version),
version 3.02 (important correction: a mixture of chi-square distributions),
version 3.05 (important correction: in FITCH and previous versions the weighed sums of squares are wrongly inflated by a factor of 2)
 
Please cite (describes the method; ver. 2.93 was used): Sanjuan R.,Wróbel B. (2005) Weighted Least-Squares Likelihood Rato Test for branch testing in phylogenies reconstructed from distance measures. Systematic Biology, 54, 218-229. 
ver. 3.02 was used in: Kijewska, A., Czarna A., Fernández M., Zdzitowiecki K., Rokicki J., Wróbel B. (2008) Analysis of 5.8S rDNA and internal transcribed spacer 1 (ITS1) sequences of ascaridoid nematodes: phylogenetic signal and hypothesis testing. Genes and Genomics, 30, 291-306.